CDS
| Accession Number | TCMCG051C33174 |
| gbkey | CDS |
| Protein Id | XP_024436895.1 |
| Location | complement(join(3852269..3852329,3852625..3852693,3852800..3852916,3853411..3853523,3853620..3853694,3854010..3854135,3854936..3855693,3855786..3855842,3856756..3857277,3858623..3858803,3858921..3859064,3859147..3859221,3859722..3859792,3860096..3860198,3860288..3860425)) |
| Gene | LOC18102977 |
| GeneID | 18102977 |
| Organism | Populus trichocarpa |
Protein
| Length | 869aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA17973 |
| db_source | XM_024581127.1 |
| Definition | katanin p80 WD40 repeat-containing subunit B1 homolog isoform X2 [Populus trichocarpa] |
EGGNOG-MAPPER Annotation
| COG_category | Z |
| Description | May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko04812 [VIEW IN KEGG] |
| KEGG_ko |
ko:K18643
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway | - |
| GOs |
GO:0000151
[VIEW IN EMBL-EBI] GO:0005575 [VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0031461 [VIEW IN EMBL-EBI] GO:0032991 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0080008 [VIEW IN EMBL-EBI] GO:1902494 [VIEW IN EMBL-EBI] GO:1990234 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGAATATGAGGATCTGGGATATCAGAAAAAAGGGCTGCATACACACTTACAAGGGTCATACTCAAGGAATTAGCACTATCAGATTTTCTCCCGATGGTCGTTGGGTGGTTTCCGGTGGATGTGATAATGTTGTAAAGGTGTGGGATCTTACTGCTGGAAAGCTTTTACATGATTTTAAGTTCCATGAAGGACATATTAGATCCATTGATTTCCATCCCCTTGAGTTTCTCCTTGCTACTGGTTCAGCAGACAGAACCGTGAAATTCTGGGATTTGGAGACCTTCGAACTGATTGGATCTGCCCGACCTGAGGCTACAGGAGTGCGCTCTATTACCTTTCATCCTGATGGAAGGACACTTTTTTGTGGATTAGATGATAGTCTGAAGGTTTATTCTTGGGAGCCTGTGATTTGCCATGATGCTGTTGATATGGGATGGTCAACACTTGGTGACCTCTGCATTCATGATGGGAAACTCTTGGGCTGTTCATTCTATAGAAACTCTGTTGGAGTTTGGGTTGGAGATATATCGTGCATTGAGCCATATGGTGATGGTTTTGTACCCAAAGAAAGTGAATGCACAGACCAGAAATTTAACATCCCTGGATGTAATTCTTCAGATAAAGTAGGAAGTGATGTGAGATCAACTTTGGGTTTCCGTTCTCCATCTCCTGACTACGAGACAAAGGAAATAAAGAACATATATGTAGACTCTACTGGTGGAAATCCTGTTACTTTACAAAGAGCTGGTTCCCTGAATTCATCAAAAGAAGTCCTCTCACTGGATTCCAAGGAAATGAGTGCTCCTCTAACCGAGAAGCAGAGCCCTTTAATGGGAATGAATGCAAATTTGAGTGAACAAACTTTTAACAAATCTTTCATTGTCCCTACCATTGTACCTCGGGACATTCCTGTTGAAAAAGATTCTTCTAATTCTGGAAAGGAAACTATCAAGTTTACAAAAACCAAACCTGGTATGTTGCTCAGACCAGCTCATGTGCGGAGGCCATCAAATAGCAAGAATGATGTTGACAAGATGTCAGTGGCTCTTGAATCTGGAAATTTTAGCAGTGTTACAAGTGAGAAAGGAAGTGCAAGAGATCCCAGCTTGCAATCCCAGATTGTAACAGAAGATGGAGCTCAAAAATCCCATGAGAAGAAAAGCCCCAGTATCAAGGGTGTCACAGAGAAGTTTGAAAAAGTTTTATCACCAGAAACACCTAATCAGGGAAACTGTGACGAATCTGTTAAAAGCAGTAAAGAGATTGCCCCTGTTAAGATTGTCAATGGAGTTGCAGTGGTATCGGGCAGGACACGTAGTCTTGTTGAGAGGTTTGAAAGAAGGGAGAAATTAAGCAGCGAAGATCAAGAATTAAACACAAGTCATCAAGCTGTGCCAGAATCAAACAGGACCTCCACCACAGAAACAAATCCGACCCCTCCTGTCATTTCTGGAACAGATAGAACACCTGTTACATCAAATATGACTCCTCTCATTGTGCCTGAAACAGACAGAACTGCCACAATAGCACCTAAAATGAACCCTTGTTTTGTACCTGAAACAGATAATACAGCCTCCGCAGCATCAAAAATGATTTCTATTGCCATACCTGAGAAGGATAGAACAGCCACCATAGCAACTAAATCAAGCCCTCGTGTTATACCTGAAACAGATAGAAAACCCTCTATATCAACTAATATGATGTCACGTGTTATATCGCAAACAGATAGAACACCCCCTGTAGCAGCCCGTATGACCTCTCGTGTTATGCCTGCAACTGATCGGACCCCCCCAGTAGCAACTATTTTCACCCCTCGTGTTGTACATGAAAGGGACAGAACACCCCCTATTCCTACAAACACTGCCATGCGAACTCCCCCAGTAGCAGCTGTTATCACCCCTCGTGTTATTCCTGAAAGGAATAGAACACCCCCTGTTCCTACTAATACAACCACGCCTGTTATACCTGCAGTGGATAGAATACCTTCCATAACTACTAATTTTACCCCTCGCATCGAATGTGAAATGGATAGAGCACCCCTCAATCTGAATGAAGAGCCTCAAATTTCTGGTAGGGACTCGACTTCTGCTAATTATAAGGATGTTATTGAAGATCTGATGCAAAGTCACGATGTATTCCTAAATACCCTTAAATCCCGCTTGACAAAGCTACAGGTGATTCGACATTTTTGGGAACGAAGTGACATTAAAGGTGCTATCAATGCCTTGAGGAAACTGCCAGATTATTCTGTGCAAGCAGATGTGATCAGTGTTCTCATGGACAAAATGGAGATTCTCAATTTAGATTTATTTTCTTGCTTGCTTCCTGTGCTTGTGGGCTTGCTAGACAGCAAGATGGAAAGGCATGCAAATATCTCATTGGAGATGCTACTGAAGCTTGTAGCGGTTTTTGGCCCTGTAATACAATCAGCTGTTTCCGCACCTCCAGTTGTTGGTGTTGATCTTCATGCAGAGCAAAGGCGAGAATGCTGCAACAAGTGCTTTGCTCAGCTGCAAAAGATCCAGCAAATTCTTCCAGCACTAGCAAGGAGGGGCGGTTTATTGACAAAAAGTGCTCTGGAATTGAATCTAGTCCTTCAACAGTCATAG |
| Protein: MNMRIWDIRKKGCIHTYKGHTQGISTIRFSPDGRWVVSGGCDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSARPEATGVRSITFHPDGRTLFCGLDDSLKVYSWEPVICHDAVDMGWSTLGDLCIHDGKLLGCSFYRNSVGVWVGDISCIEPYGDGFVPKESECTDQKFNIPGCNSSDKVGSDVRSTLGFRSPSPDYETKEIKNIYVDSTGGNPVTLQRAGSLNSSKEVLSLDSKEMSAPLTEKQSPLMGMNANLSEQTFNKSFIVPTIVPRDIPVEKDSSNSGKETIKFTKTKPGMLLRPAHVRRPSNSKNDVDKMSVALESGNFSSVTSEKGSARDPSLQSQIVTEDGAQKSHEKKSPSIKGVTEKFEKVLSPETPNQGNCDESVKSSKEIAPVKIVNGVAVVSGRTRSLVERFERREKLSSEDQELNTSHQAVPESNRTSTTETNPTPPVISGTDRTPVTSNMTPLIVPETDRTATIAPKMNPCFVPETDNTASAASKMISIAIPEKDRTATIATKSSPRVIPETDRKPSISTNMMSRVISQTDRTPPVAARMTSRVMPATDRTPPVATIFTPRVVHERDRTPPIPTNTAMRTPPVAAVITPRVIPERNRTPPVPTNTTTPVIPAVDRIPSITTNFTPRIECEMDRAPLNLNEEPQISGRDSTSANYKDVIEDLMQSHDVFLNTLKSRLTKLQVIRHFWERSDIKGAINALRKLPDYSVQADVISVLMDKMEILNLDLFSCLLPVLVGLLDSKMERHANISLEMLLKLVAVFGPVIQSAVSAPPVVGVDLHAEQRRECCNKCFAQLQKIQQILPALARRGGLLTKSALELNLVLQQS |